Basic Information
Locus ID:
nbisL1-mrna-5303
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000018F_pilon | 1223232 | 1240980 | - | nbisL1-mrna-5303 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 368,652.53 Da | 44.92 | 103.25 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 2811 | 3067 | 6.04E-11 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2434 | 2618 | 2.67E-12 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 437 | 681 | 7.38E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1629 | 1870 | 1.88E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1886 | 2162 | 2.35E-16 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 17 | 276 | 4.55E-11 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 697 | 913 | 1.49E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2572 | 2788 | 7.14E-16 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 938 | 1218 | 1.33E-17 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 3082 | 3213 | 6.83E-9 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1286 | 1471 | 1.41E-10 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 2191 | 2410 | 1.87E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1233 | 1475 | 8.8E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 7 | 297 | 1.4E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2184 | 2353 | 4.8E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1076 | 1227 | 3.7E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 587 | 9.0E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2964 | 3218 | 5.1E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 779 | 1075 | 4.0E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 596 | 778 | 1.8E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1968 | 2183 | 7.6E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1783 | 1964 | 4.3E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2425 | 2700 | 1.2E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1531 | 1779 | 6.7E-8 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2718 | 2947 | 8.8E-15 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_040961068.1 | uncharacterized protein LOC107925792 isoform X3 [Gossypium hirsutum] | 0 |
| TrEMBL | A0A2P2MRK2 | Putative disease resistance protein At4g27220 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology