Basic Information
Locus ID:
nbisL1-mrna-5299
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
disease resistance
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000018F_pilon | 1191751 | 1206987 | - | nbisL1-mrna-5299 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 348,219.63 Da | 47.37 | 102.60 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 160 | 396 | 1.6E-43 | IPR002182 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 155 | 409 | 7.25E-45 | IPR027417 |
| SUPERFAMILY | SSF52058 | L domain-like | 899 | 1303 | 9.86E-14 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1431 | 1688 | 5.1E-15 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1707 | 1984 | 1.02E-17 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 468 | 860 | 5.1E-26 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2107 | 2328 | 2.28E-9 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2905 | 3039 | 1.73E-8 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2624 | 2890 | 1.73E-12 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2373 | 2615 | 9.42E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 882 | 1071 | 4.1E-13 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 309 | 397 | 1.4E-14 | IPR042197 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2525 | 2769 | 2.4E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 500 | 881 | 2.5E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2819 | 3043 | 5.2E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1998 | 2184 | 2.6E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2193 | 2519 | 3.1E-9 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1604 | 1785 | 1.0E-11 | IPR032675 |
| Gene3D | G3DSA:3.40.50.300 | - | 153 | 308 | 4.6E-29 | IPR027417 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1790 | 1996 | 2.2E-12 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1362 | 1596 | 2.0E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1072 | 1299 | 5.6E-7 | IPR032675 |
| PRINTS | PR00364 | Disease resistance protein signature | 617 | 633 | 6.3E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 342 | 356 | 6.3E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 250 | 264 | 6.3E-16 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 177 | 192 | 6.3E-16 | - |
| Coils | Coil | Coil | 57 | 98 | - | - |
| Coils | Coil | Coil | 2064 | 2084 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27220.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_043814373.1 | uncharacterized protein LOC110618951 isoform X1 [Manihot esculenta] | 0 |
| O81825 | Probable disease resistance protein At4g27220 OS=Arabidopsis thaliana OX=3702 GN=At4g27220 PE=2 SV=1 | 0 | |
| TrEMBL | B9REY6 | Phosphoprotein phosphatase, putative OS=Ricinus communis OX=3988 GN=RCOM_1429720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology