Basic Information
Locus ID:
nbisL1-mrna-5270
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
EDR1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000018F_pilon | 1046759 | 1049782 | + | nbisL1-mrna-5270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.67 | 33,620.54 Da | 41.16 | 95.73 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 27 | 172 | 1.5E-36 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 28 | 190 | 8.09E-49 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 14 | 184 | 2.6E-53 | - |
| SMART | SM00220 | serkin_6 | 1 | 177 | 5.4E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 181 | 26.85956 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 41 | 53 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 35 | 53 | 3.8E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 101 | 123 | 3.8E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 145 | 167 | 3.8E-10 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 82 | 92 | 3.8E-10 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G08720.1 | Protein kinase superfamily protein. enhanced disease resistance 1 (EDR1) confers resistance to powdery mildew disease caused by the fungus Erysiphe cichoracearum | 0 |
| RefSeq | XP_012089199.1 | serine/threonine-protein kinase EDR1 [Jatropha curcas] | 0 |
| Q9FPR3 | Serine/threonine-protein kinase EDR1 OS=Arabidopsis thaliana OX=3702 GN=EDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A9PE09 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000023760 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G007120, scaffold038440G000020 |
| Brassicaceae | Brassica nigra | 3 | BniB02g080230.2N, BniB04g023250.2N, BniB07g059490.2N |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.3018s00001.v1.0 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-5472 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr13G015500 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-34314 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_11_RagTag.721 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3393 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-5270 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1046 |
| Salicaceae | Populus euphratica | 1 | populus_peu28322 |