Basic Information
Locus ID:
nbisL1-mrna-5245
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr03 | 660559 | 664592 | - | nbisL1-mrna-5245 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.83 | 51,612.51 Da | 44.96 | 77.20 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 128 | 405 | 6.42893E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 127 | 400 | 3.9E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 96 | 402 | 5.72E-79 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 97 | 207 | 1.6E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 208 | 428 | 5.2E-64 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 120 | 196 | 1.1 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 200 | 444 | 3.6E-13 | - |
| PIRSF | PIRSF000615 | TyrPK_CSF1-R | 15 | 78 | 350.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 122 | 406 | 41.488251 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 128 | 156 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 41 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 102 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 430 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G09830.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021655821.1 | probable serine/threonine-protein kinase PBL19 [Hevea brasiliensis] | 0 |
| Q9SF86 | Serine/threonine-protein kinase PCRK1 OS=Arabidopsis thaliana OX=3702 GN=PCRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A251K549 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_09G067700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology