Basic Information
Locus ID:
nbisL1-mrna-5226
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
translocase of chloroplast 159
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002084F_pilon | 3944424 | 3948848 | - | nbisL1-mrna-5226 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.87 | 131,963.73 Da | 40.65 | 79.61 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01853 | Toc34_like | 539 | 791 | 1.00177E-115 | - |
| Pfam | PF04548 | AIG1 family | 570 | 720 | 3.9E-22 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 937 | 1201 | 9.1E-126 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 563 | 729 | 2.82E-13 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 546 | 800 | 2.7E-53 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 456 | 1214 | 0.0 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 567 | 801 | 29.349277 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 396 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 356 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 396 | - | - |
| Coils | Coil | Coil | 490 | 510 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G02510.1 | translocon at the outer envelope membrane of chloroplasts 159. An integral membrane GTPase that functions as a transit-sequence receptor required for the import of proteins necessary for chloroplast biogenesis. Located in the outer chloroplast membrane. Phosphorylation of the G-domains regulate translocon assembly. | 0 |
| RefSeq | XP_021637087.1 | translocase of chloroplast 159, chloroplastic-like [Hevea brasiliensis] | 0 |
| O81283 | Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC159 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MRB4 | AIG1-type G domain-containing protein OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology