Basic Information
Locus ID:
nbisL1-mrna-5205
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
AarF domain-containing protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 4142297 | 4152122 | + | nbisL1-mrna-5205 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.39 | 61,143.40 Da | 40.22 | 99.52 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13969 | ADCK1-like | 133 | 384 | 7.96973E-129 | - |
| Pfam | PF03109 | ABC1 family | 153 | 267 | 7.6E-38 | IPR004147 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 135 | 372 | 2.43E-24 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 360 | 4.5E-7 | - |
| Coils | Coil | Coil | 409 | 429 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021643511.1 | uncharacterized aarF domain-containing protein kinase 1 isoform X1 [Hevea brasiliensis] | 0 |
| Q9D0L4 | AarF domain-containing protein kinase 1 OS=Mus musculus OX=10090 GN=Adck1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WK49 | ABC1 domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G122600 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31000 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_13036 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah033158 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g038010 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg19870, Sbi_jg44211 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg17803 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00010589 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl64578, Sgl69028 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000014885, gene:ENSEOMG00000017564 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.2AG0008000 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30189180 |
| Apiaceae | Apium graveolens | 1 | Ag7G01548 |
| Arecaceae | Cocos nucifera | 1 | scaffold015965G000020 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103713036, gene-LOC120110984 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_07.3615.V1.1, AsparagusV1_07.3616.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri18G22166 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT1G65950.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10018274m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp5g21020.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB03g043370.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0592 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0559 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno11g10500 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.1201s00001.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate05g25270 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG02.42 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00021204 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G01660 |
| Poaceae | Echinochloa crus-galli | 3 | AH09.677, BH09.571, CH09.754 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_9AG0685880, gene-QOZ80_9BG0712020 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0245470.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_066375, gene-QYE76_066781 |
| Poaceae | Oryza coarctata | 2 | Oco21G007090, Oco22G008200 |
| Poaceae | Oryza sativa | 2 | LOC_Os11g34750.1, LOC_Os11g34830.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G165700, gene-BS78_05G280400 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0103271, Pt_Chr0103289 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr16G005950, Chr17G005350 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G251100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG018500, gene_TRIDC3BG023450 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G140300.1, TraesCS3B02G164200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb201710_P002 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-45749 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18955 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG05.1303, evm.TU.LG25.34 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc08g05000 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_3_RagTag.774, evm.TU.Scaffold_3_RagTag.775 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-1184 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-17245 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6451 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000019l.741 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00012500 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-5205 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13210 |
| Salicaceae | Populus euphratica | 1 | populus_peu09784 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132615297 |
| Solanaceae | Solanum chilense | 1 | SOLCI005855500 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107018120 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_9869 |
| Tamaricaceae | Tamarix chinensis | 1 | TC08G0989 |
| Zosteraceae | Zostera marina | 3 | Zosma01g10480.v3.1, Zosma07g04520.v3.1, Zosma07g04530.v3.1 |