Basic Information
Locus ID:
nbisL1-mrna-5121
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000018F_pilon | 152543 | 161607 | + | nbisL1-mrna-5121 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.68 | 58,619.47 Da | 41.09 | 91.33 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 276 | 476 | 7.1E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 227 | 485 | 3.81E-72 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 284 | 494 | 2.2E-64 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 220 | 279 | 3.8E-13 | - |
| SMART | SM00220 | serkin_6 | 243 | 479 | 1.3E-19 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 179 | 485 | 27.21291 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 249 | 272 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 330 | 342 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 527 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 511 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56720.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021623276.1 | probable receptor-like protein kinase At2g42960 [Manihot esculenta] | 0 |
| Q9SJG2 | Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana OX=3702 GN=At2g42960 PE=3 SV=1 | 0 | |
| TrEMBL | A0A251K996 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_09G180300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology