Basic Information
Locus ID:
nbisL1-mrna-5116
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 22519994 | 22523262 | + | nbisL1-mrna-5116 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.51 | 75,363.42 Da | 47.90 | 83.75 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 337 | 603 | 2.89858E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 335 | 600 | 2.2E-42 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 311 | 603 | 1.75E-73 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 13 | 140 | 2.3E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 300 | 406 | 1.1E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 407 | 632 | 1.5E-58 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 1 | 139 | 1.1E-5 | IPR014729 |
| SMART | SM00220 | serkin_6 | 331 | 603 | 2.7E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 331 | 612 | 35.933586 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 453 | 465 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 193 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 177 | 214 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 611 | 636 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G16750.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_002305520.1 | protein kinase STUNTED [Populus trichocarpa] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T2YZU2 | Protein kinase domain-containing protein OS=Populus deltoides OX=3696 GN=H0E87_008180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg26137, jg28871, jg891 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_26687 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah009664 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g214070 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12227, Sbi_jg47195 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg21468 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020441 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl55457, Sgl56115, Sgl61448 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000016335, gene:ENSEOMG00000037955 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.7BG0002880, CQ.Regalona.r1.9AG0021740 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30110150 |
| Apiaceae | Apium graveolens | 2 | Ag6G02372, Ag9G02108 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G002600, COCNU_10G001750 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103714632, gene-LOC103724130 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2127.V1.1, AsparagusV1_10.186.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G11923 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT2G16750.1, AT4G35030.3 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10022595m.g.v1.0, Thhalv10026926m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp3g29970.v2.2, Sp7g32800.v2.2 |
| Brassicaceae | Brassica nigra | 3 | BniB03g064130.2N, BniB04g026570.2N, BniB05g003320.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1707 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G1852 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno10g09460 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate08g21590 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-9458, nbisL1-mrna-9459 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG08.313 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00001657, Pov_00007356 |
| Plumbaginaceae | Limonium bicolor | 3 | Lb2G13729, Lb3G17629, Lb8G36094 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.4378, CH01.4998, Contig192.19 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0240430, gene-QOZ80_3BG0287560 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0392940.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_069365 |
| Poaceae | Oryza coarctata | 2 | Oco05G007770, Oco06G008080 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g13820.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G422200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0101989 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr01G029100, Chr12G010420 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG010250, gene_TRIDC4BG040330 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G072300.1, TraesCS4B02G228200.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb010320_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-2326 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g1678 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG02.1826, evm.TU.LG08.1126, evm.TU.LG09.114 ... |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g09310 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.2318, evm.TU.Scaffold_2_RagTag.93 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5116 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-11001, nbisL1-mrna-7928 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-3243, nbisL1-mrna-9350 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000009l.1183, evm.TU.utg000016l.63 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00006046, Maker00016776 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-14126, nbisL1-mrna-4619 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-21153, nbisL1-mrna-22459 |
| Salicaceae | Populus euphratica | 2 | populus_peu08702, populus_peu35415 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599327 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107007907 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.11790_chr02_-, gene_12323 |
| Tamaricaceae | Tamarix chinensis | 2 | TC10G0129, TC12G0758 |
| Zosteraceae | Zostera marina | 2 | Zosma01g22190.v3.1, Zosma05g31140.v3.1 |