Basic Information
Locus ID:
nbisL1-mrna-5081
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
PRK1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000139F_pilon | 6378026 | 6380378 | - | nbisL1-mrna-5081 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 72,758.87 Da | 41.70 | 85.55 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 134 | 180 | 1.7E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 357 | 623 | 2.4E-33 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 68 | 7.5E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 357 | 628 | 4.21E-49 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 226 | 2.93E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 235 | 1.5E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 188 | 3.4E-36 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 324 | 428 | 6.1E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 646 | 6.9E-40 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 353 | 628 | 28.089218 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 661 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 289 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 308 | 336 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 232 | 256 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_011019962.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RLK [Populus euphratica] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5J649 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_028695 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology