Basic Information
Locus ID:
nbisL1-mrna-504
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
L-type lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001172F_pilon | 3121843 | 3123996 | - | nbisL1-mrna-504 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 77,285.83 Da | 36.29 | 89.61 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 394 | 661 | 1.19731E-92 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 37 | 259 | 5.9592E-82 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 37 | 269 | 4.1E-58 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 389 | 600 | 2.5E-51 | IPR000719 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 36 | 276 | 1.4E-61 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 370 | 692 | 7.55E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 667 | 8.3E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 350 | 463 | 1.0E-31 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 35 | 275 | 1.7E-64 | - |
| SMART | SM00220 | serkin_6 | 388 | 661 | 2.2E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 388 | 670 | 39.297478 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 394 | 418 | - | IPR017441 |
| ProSitePatterns | PS00307 | Legume lectins beta-chain signature. | 148 | 154 | - | IPR019825 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 507 | 519 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 315 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_021608773.2 | L-type lectin-domain containing receptor kinase VIII.1 [Manihot esculenta] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9W776 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_03G063500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology