Basic Information
Locus ID:
nbisL1-mrna-5034
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1474208 | 1478326 | + | nbisL1-mrna-5034 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.18 | 60,942.87 Da | 44.93 | 71.84 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 116 | 481 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 120 | 417 | 1.2E-65 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 436 | 480 | 2.5E-6 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 93 | 468 | 1.04E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 202 | 435 | 7.7E-110 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 116 | 446 | 7.7E-110 | - |
| SMART | SM00133 | pkinase_C_6 | 418 | 482 | 4.1E-8 | IPR000961 |
| SMART | SM00220 | serkin_6 | 118 | 417 | 1.2E-104 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 418 | 490 | 14.48259 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 118 | 417 | 47.693077 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 237 | 249 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 124 | 147 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 23 | - | - |
| Coils | Coil | Coil | 60 | 94 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14350.3 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_038991684.1 | serine/threonine-protein kinase tricornered-like [Hibiscus syriacus] | 0 |
| Q2LZZ7 | Serine/threonine-protein kinase tricornered OS=Drosophila pseudoobscura pseudoobscura OX=46245 GN=trc PE=3 SV=1 | 0 | |
| TrEMBL | A0A6A3BBB2 | Serine/threonine-protein kinase tricorner OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110257pilonHSYRG00106 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology