Basic Information
Locus ID:
nbisL1-mrna-5033
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Ubiquitin system component Cue protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000139F_pilon | 6100037 | 6102725 | - | nbisL1-mrna-5033 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 38,257.53 Da | 55.48 | 74.93 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14279 | CUE | 120 | 154 | 2.8758E-8 | - |
| Pfam | PF02845 | CUE domain | 120 | 157 | 1.2E-5 | IPR003892 |
| SUPERFAMILY | SSF46934 | UBA-like | 110 | 164 | 1.22E-9 | IPR009060 |
| Gene3D | G3DSA:1.10.8.10 | - | 105 | 164 | 1.2E-6 | - |
| ProSiteProfiles | PS51140 | CUE domain profile. | 116 | 159 | 12.820295 | IPR003892 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 116 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 116 | - | - |
| Coils | Coil | Coil | 288 | 315 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G32440.1 | Ubiquitin system component Cue protein. | 0 |
| RefSeq | XP_021640758.1 | uncharacterized protein LOC110635647 [Hevea brasiliensis] | 0 |
| TrEMBL | A0A2P2MFR6 | CUE domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology