Basic Information
Locus ID:
nbisL1-mrna-5013
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Monogalactosyldiacylglycerol synthase 2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000139F_pilon | 5961269 | 5964252 | + | nbisL1-mrna-5013 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.44 | 52,613.03 Da | 31.91 | 89.38 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17507 | GT28_Beta-DGS-like | 72 | 447 | 2.75382E-135 | - |
| Pfam | PF04101 | Glycosyltransferase family 28 C-terminal domain | 298 | 410 | 2.1E-10 | IPR007235 |
| Pfam | PF06925 | Monogalactosyldiacylglycerol (MGDG) synthase | 83 | 251 | 3.0E-62 | IPR009695 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 72 | 449 | 5.11E-26 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 259 | 432 | 3.5E-28 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20410.1 | monogalactosyldiacylglycerol synthase 2. Encodes a type B monogalactosyldiacylglycerol (MGDG) synthase. Strongly induced by phosphate deprivation, and in non-photosynthetic tissues. Does not contribute to galactolipid synthesis under Pi-sufficient conditions but does under Pi starvation. | 0 |
| RefSeq | XP_002530758.2 | monogalactosyldiacylglycerol synthase 2, chloroplastic [Ricinus communis] | 0 |
| O82730 | Monogalactosyldiacylglycerol synthase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MGD2 PE=1 SV=1 | 0 | |
| TrEMBL | B9SXN9 | monogalactosyldiacylglycerol synthase OS=Ricinus communis OX=3988 GN=RCOM_0003390 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology