Basic Information
Locus ID:
nbisL1-mrna-5002
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
IAA7
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1251976 | 1253520 | + | nbisL1-mrna-5002 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 26,875.29 Da | 49.83 | 61.31 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 13 | 236 | 8.0E-80 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 121 | 226 | 1.63E-19 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 120 | 239 | 5.9E-43 | - |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 34 | 5.0 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 126 | 227 | 23.236452 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 52 | - | - |
| Coils | Coil | Coil | 238 | 245 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14550.1 | indole-3-acetic acid inducible 14. IAA14 is a member of the Aux/IAA protein family. Involved in lateral root development. Gain of function mutation decreases auxin-inducible gene expression. Protein is localized to the nucleus. Expressed in stele and root tip epidermis. Functions as a negative regulator of ARF7/19. | 0 |
| RefSeq | XP_039002069.1 | auxin-responsive protein IAA14-like isoform X1 [Hibiscus syriacus] | 0 |
| Q38832 | Auxin-responsive protein IAA14 OS=Arabidopsis thaliana OX=3702 GN=IAA14 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A3AEB7 | Auxin-responsive protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110480pilonHSYRG00077 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology