Basic Information
Locus ID:
nbisL1-mrna-5001
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 13297509 | 13300544 | - | nbisL1-mrna-5001 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 55,173.30 Da | 40.44 | 77.74 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 73 | 308 | 1.9E-25 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 35 | 323 | 7.65E-44 | IPR011009 |
| SUPERFAMILY | SSF48452 | TPR-like | 390 | 482 | 1.7E-11 | IPR011990 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 31 | 134 | 5.6E-30 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 136 | 328 | 5.9E-44 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 384 | 491 | 7.1E-12 | IPR011990 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 313 | 20.428589 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54030.1 | Protein kinase protein with tetratricopeptide repeat domain. | 0 |
| RefSeq | XP_034913950.1 | serine/threonine-protein kinase BSK6-like [Populus alba] | 0 |
| Q9M324 | Serine/threonine-protein kinase BSK6 OS=Arabidopsis thaliana OX=3702 GN=BSK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8X8D0G2 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_022994 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology