Basic Information
Locus ID:
nbisL1-mrna-4999
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002084F_pilon | 2662389 | 2665574 | + | nbisL1-mrna-4999 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.27 | 94,311.71 Da | 27.73 | 102.54 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 76 | 5.9E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 722 | 811 | 6.8E-8 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 499 | 557 | 3.7E-7 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 138 | 160 | 0.02 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 677 | 839 | 2.22E-20 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 346 | 2.89E-53 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 313 | 567 | 6.67E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 327 | 593 | 1.6E-73 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 91 | 323 | 1.3E-75 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 90 | 3.1E-9 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 709 | 864 | 5.7E-27 | - |
| SMART | SM00369 | LRR_typ_2 | 304 | 328 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 160 | 184 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 256 | 280 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 520 | 544 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 425 | 448 | 250.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 674 | 840 | 0.0075 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 136 | 159 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 400 | 423 | 64.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 535 | 865 | 8.570164 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 680 | 704 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 840 | 874 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 845 | 874 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_034916139.1 | MDIS1-interacting receptor like kinase 1 [Populus alba] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5NT97 | Protein kinase domain-containing protein OS=Salix brachista OX=2182728 GN=DKX38_003639 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology