Basic Information
Locus ID:
nbisL1-mrna-4996
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
FBP
Description:
Belongs to the FBPase class 1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 13269181 | 13270944 | - | nbisL1-mrna-4996 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 45,073.81 Da | 41.27 | 90.46 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00354 | FBPase | 88 | 416 | 0.0 | IPR000146 |
| Pfam | PF00316 | Fructose-1-6-bisphosphatase, N-terminal domain | 86 | 283 | 5.1E-55 | IPR033391 |
| Pfam | PF18913 | Fructose-1-6-bisphosphatase, C-terminal domain | 288 | 416 | 5.1E-51 | IPR044015 |
| SUPERFAMILY | SSF56655 | Carbohydrate phosphatase | 78 | 416 | 1.07E-111 | - |
| Gene3D | G3DSA:3.30.540.10 | - | 81 | 283 | 7.8E-87 | - |
| Gene3D | G3DSA:3.40.190.80 | - | 285 | 416 | 8.8E-64 | - |
| PIRSF | PIRSF500210 | FBPtase | 73 | 417 | 2.3E-117 | IPR028343 |
| PIRSF | PIRSF000904 | FBPtase_SBPase | 67 | 417 | 6.5E-113 | IPR000146 |
| ProSitePatterns | PS00124 | Fructose-1-6-bisphosphatase active site. | 358 | 370 | - | IPR020548 |
| PRINTS | PR00115 | Fructose-1,6-bisphosphatase signature | 392 | 417 | 1.5E-61 | IPR028343 |
| PRINTS | PR00115 | Fructose-1,6-bisphosphatase signature | 268 | 291 | 1.5E-61 | IPR028343 |
| PRINTS | PR00115 | Fructose-1,6-bisphosphatase signature | 237 | 260 | 1.5E-61 | IPR028343 |
| PRINTS | PR00115 | Fructose-1,6-bisphosphatase signature | 143 | 169 | 1.5E-61 | IPR028343 |
| PRINTS | PR00115 | Fructose-1,6-bisphosphatase signature | 106 | 133 | 1.5E-61 | IPR028343 |
| PRINTS | PR00115 | Fructose-1,6-bisphosphatase signature | 294 | 321 | 1.5E-61 | IPR028343 |
| Hamap | MF_01855 | Fructose-1,6-bisphosphatase class 1 [fbp]. | 82 | 417 | 38.072178 | IPR000146 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00030 (Pentose phosphate pathway)
map00030 (Pentose phosphate pathway)
ko00051 (Fructose and mannose metabolism)
map00051 (Fructose and mannose metabolism)
ko00680 (Methane metabolism)
map00680 (Methane metabolism)
ko00710 (Carbon fixation by Calvin cycle)
map00710 (Carbon fixation by Calvin cycle)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
Module:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G54050.1 | high cyclic electron flow 1. Encodes HCEF1 (High Cyclic Electron Flow 1). Mutant phenotype: constitutively elevated electron flow (CEFI). | 0 |
| RefSeq | XP_012087955.1 | fructose-1,6-bisphosphatase, chloroplastic [Jatropha curcas] | 0 |
| P46275 | Fructose-1,6-bisphosphatase, chloroplastic OS=Pisum sativum OX=3888 GN=FBP PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2JB68 | fructose-bisphosphatase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg32146 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_2435 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah010674 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_5g111310 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg31970, Sbi_jg57360 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg25078 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022177 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl54001, Sgl54019, Sgl59335, Sgl59361 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000007276, gene:ENSEOMG00000024121 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.5AG0014090, CQ.Regalona.r1.5BG0015360 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30285180 |
| Apiaceae | Apium graveolens | 3 | Ag2G01890, Ag7G02370, Ag8G00130 |
| Arecaceae | Cocos nucifera | 1 | COCNU_16G008630 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103722531 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_07.55.V1.1, AsparagusV1_08.3588.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri12G28156, Ftri3G25886 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G54050.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10010414m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp5g08330.v2.2, SpUn1292_0010.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB06g065670.2N, BniB08g068360.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G1071 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G1096 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno04g18370 |
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0106s00008.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate06g00090 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.1093 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00002807 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G26133 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.4229, BH01.4533, CH01.4835 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0242350, gene-QOZ80_3BG0285800 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0389260.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_069075 |
| Poaceae | Oryza coarctata | 1 | Oco06G009500 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g16050.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G405600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0102211, Pt_Chr0102241 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr01G030670, Chr04G007450, Chr07G004190, Chr12G008940 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G372200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG012650, gene_TRIDC4BG037670 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G093100.1, TraesCS4B02G211400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb011940_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-2133, nbis-gene-2134, nbis-gene-3793 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g1561, Zma_g3953 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG03.2188, evm.TU.LG17.1247 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g40380 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_1_RagTag.1751 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5542 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1429 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3750 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.657 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016824 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4996 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13709 |
| Salicaceae | Populus euphratica | 3 | populus_peu11382, populus_peu25546, populus_peu25547 |
| Solanaceae | Lycium barbarum | 3 | gene-LOC132606824, gene-LOC132606825, gene-LOC132630619 |
| Solanaceae | Solanum chilense | 3 | SOLCI000860300, SOLCI000860400, SOLCI003086600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107002346, gene-LOC107031241 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.26850_chr04_- |
| Tamaricaceae | Tamarix chinensis | 2 | TC02G1828, TC07G0353 |
| Zosteraceae | Zostera marina | 1 | Zosma01g41020.v3.1 |