Basic Information
Locus ID:
nbisL1-mrna-4989
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1125251 | 1126909 | - | nbisL1-mrna-4989 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 42,068.10 Da | 30.65 | 80.87 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 84 | 353 | 4.01355E-112 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 79 | 352 | 1.1E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 353 | 1.89E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 179 | 364 | 5.2E-61 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 158 | 4.0E-18 | - |
| SMART | SM00220 | serkin_6 | 78 | 356 | 4.2E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 78 | 356 | 40.92289 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 220 | 232 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 214 | 232 | 4.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 280 | 302 | 4.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 176 | 189 | 4.4E-16 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 324 | 346 | 4.4E-16 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_039036526.1 | serine/threonine-protein kinase STY13-like [Hibiscus syriacus] | 0 |
| Q9SSA4 | Serine/threonine-protein kinase 54 OS=Arabidopsis thaliana OX=3702 GN=CBC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A2X918 | Tesmin/TSO1-like CXC domain-containing protein, putative isoform 1 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111947pilonHSYRG00273 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology