Basic Information
Locus ID:
nbisL1-mrna-4988
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
HMT3
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 1115265 | 1120230 | - | nbisL1-mrna-4988 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 40,930.04 Da | 41.59 | 89.79 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 59 | 366 | 2.5E-79 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 55 | 367 | 4.05E-86 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 49 | 366 | 7.2E-105 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 322 | 373 | 1.2 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 232 | 310 | 99.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 50 | 241 | 8.9E-8 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 46 | 367 | 47.596684 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G22740.1 | homocysteine S-methyltransferase 3. homocysteine S-methyltransferase (HMT3) | 0 |
| RefSeq | XP_039060778.1 | homocysteine S-methyltransferase 3-like [Hibiscus syriacus] | 0 |
| Q8LAX0 | Homocysteine S-methyltransferase 3 OS=Arabidopsis thaliana OX=3702 GN=HMT3 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5D2LTJ6 | Hcy-binding domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D02G054800v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology