Basic Information
Locus ID:
nbisL1-mrna-4959
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 898752 | 903355 | - | nbisL1-mrna-4959 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 120,346.50 Da | 51.33 | 68.16 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 850 | 1072 | 2.96899E-76 | - |
| CDD | cd06410 | PB1_UP2 | 129 | 224 | 1.5968E-42 | - |
| Pfam | PF00564 | PB1 domain | 141 | 225 | 5.0E-20 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 846 | 1068 | 2.2E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 837 | 1072 | 1.18E-57 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 142 | 228 | 3.36E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 144 | 227 | 6.9E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 825 | 1074 | 2.0E-59 | - |
| SMART | SM00666 | PB1_new | 140 | 227 | 1.5E-30 | IPR000270 |
| SMART | SM00220 | serkin_6 | 844 | 1085 | 6.7E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 844 | 1085 | 36.414143 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 979 | 991 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 850 | 871 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 816 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 772 | 788 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 789 | 810 | - | - |
| Coils | Coil | Coil | 825 | 845 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_040944630.1 | probable serine/threonine-protein kinase DDB_G0278521 [Gossypium hirsutum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5D2RCF3 | Protein kinase domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_A02G031500v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology