Basic Information
Locus ID:
nbisL1-mrna-4952
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 12932227 | 12934861 | + | nbisL1-mrna-4952 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 36,583.26 Da | 43.26 | 84.57 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13499 | EF-hand domain pair | 154 | 214 | 2.7E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 6 | 108 | 1.1E-26 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 226 | 289 | 2.1E-14 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 134 | 4.01E-34 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 137 | 315 | 6.24E-44 | IPR011992 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 3 | 115 | 9.5E-36 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 116 | 292 | 1.2E-52 | - |
| SMART | SM00054 | efh_1 | 155 | 183 | 2.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 227 | 255 | 6.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 263 | 291 | 2.2E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 1 | 108 | 7.4E-6 | IPR000719 |
| SMART | SM00054 | efh_1 | 191 | 219 | 1.2 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 108 | 20.668867 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 223 | 258 | 14.318138 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 259 | 294 | 14.011288 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 151 | 186 | 16.298712 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 236 | 248 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 164 | 176 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 272 | 284 | - | IPR018247 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_044511817.1 | calcium-dependent protein kinase 13-like [Mangifera indica] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7J8YEE0 | Calcium-dependent protein kinase (Fragment) OS=Gossypium aridum OX=34290 GN=Goari_021462 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology