Basic Information
Locus ID:
nbisL1-mrna-4938
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
CIPK6
Description:
CBL-interacting serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000139F_pilon | 5499175 | 5500413 | + | nbisL1-mrna-4938 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.86 | 34,012.32 Da | 34.79 | 81.18 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 17 | 201 | 6.5E-49 | IPR000719 |
| Pfam | PF03822 | NAF domain | 258 | 297 | 1.1E-12 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 201 | 1.35E-57 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 255 | 300 | 1.4E-10 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 10 | 203 | 2.2E-62 | - |
| ProSiteProfiles | PS50816 | NAF domain profile. | 256 | 280 | 13.319201 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 17 | 305 | 34.506054 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30960.1 | SOS3-interacting protein 3. Encodes CBL-interacting protein kinase 6 (CIPK6). Required for development and salt tolerance. | 0 |
| RefSeq | XP_021681391.1 | CBL-interacting serine/threonine-protein kinase 6-like [Hevea brasiliensis] | 0 |
| O65554 | CBL-interacting serine/threonine-protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CIPK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A6MDK4 | non-specific serine/threonine protein kinase OS=Hevea brasiliensis OX=3981 GN=GH714_011479 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg23781 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg40403 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_051071 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_4_RagTag.2183 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-4938 |