Basic Information
Locus ID:
nbisL1-mrna-4877
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr2 | 160245 | 163738 | - | nbisL1-mrna-4877 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.04 | 39,776.56 Da | 44.88 | 91.50 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 43 | 298 | 5.13303E-122 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 39 | 298 | 1.7E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 32 | 313 | 7.28E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 25 | 116 | 7.0E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 120 | 325 | 6.4E-58 | - |
| SMART | SM00220 | serkin_6 | 37 | 302 | 8.7E-72 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 302 | 45.318565 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 64 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 157 | 169 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 113 | 126 | 1.5E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 225 | 247 | 1.5E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 151 | 169 | 1.5E-9 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 269 | 291 | 1.5E-9 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01850.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_017634127.1 | PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Gossypium arboreum] | 0 |
| Q9ZQ31 | Serine/threonine-protein kinase STY13 OS=Arabidopsis thaliana OX=3702 GN=STY13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7J9BNG4 | Protein kinase domain-containing protein OS=Gossypium gossypioides OX=34282 GN=Gogos_011177 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology