Basic Information
Locus ID:
nbisL1-mrna-4862
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 002084F_pilon | 1904346 | 1908122 | + | nbisL1-mrna-4862 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.45 | 109,977.77 Da | 34.95 | 98.99 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 518 | 575 | 1.8E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 41 | 80 | 2.5E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 700 | 916 | 2.3E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 155 | 214 | 4.5E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 55 | 389 | 7.14E-56 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 326 | 623 | 2.47E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 692 | 974 | 4.32E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 296 | 1.3E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 297 | 632 | 1.6E-86 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 194 | 2.4E-42 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 681 | 781 | 6.0E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 782 | 994 | 5.8E-64 | - |
| SMART | SM00220 | serkin_6 | 699 | 967 | 2.7E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 699 | 996 | 38.689716 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 254 | 277 | 7.242212 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 705 | 728 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 826 | 838 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 975 | 1004 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_021658128.1 | receptor-like protein kinase HSL1 [Hevea brasiliensis] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | B9MYC8 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_017G016600 PE=3 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology