Basic Information
Locus ID:
nbisL1-mrna-4855
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
WRKY14
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 64283900 | 64286023 | + | nbisL1-mrna-4855 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 44,164.68 Da | 61.17 | 63.61 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 221 | 278 | 5.4E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 217 | 280 | 3.79E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 193 | 273 | 3.6E-29 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 219 | 279 | 5.4E-36 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 214 | 280 | 30.997076 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 331 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30650.1 | WRKY DNA-binding protein 14. member of WRKY Transcription Factor; Group II-e | 0 |
| RefSeq | XP_039043982.1 | probable WRKY transcription factor 14 isoform X1 [Hibiscus syriacus] | 0 |
| Q9SA80 | Probable WRKY transcription factor 14 OS=Arabidopsis thaliana OX=3702 GN=WRKY14 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6A2XRF1 | Putative WRKY transcription factor 65 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00112758pilonHSYRG00059 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg20844, jg22360, jg25065 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22690 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010549, gene:ENSEOMG00000032762 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0009680, CQ.Regalona.r1.8BG0010660 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30077760 |
| Apiaceae | Apium graveolens | 2 | Ag1G01465, Ag7G01832 |
| Arecaceae | Cocos nucifera | 2 | COCNU_07G002900, COCNU_10G002070 |
| Arecaceae | Phoenix dactylifera | 2 | gene-LOC103699722, gene-LOC103706394 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_01.687.V1.1, AsparagusV1_04.907.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G26134 |
| Brassicaceae | Arabidopsis thaliana | 2 | AT1G30650.1, AT2G34830.1 |
| Brassicaceae | Eutrema salsugineum | 2 | Thhalv10007691m.g.v1.0, Thhalv10016714m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 2 | Sp1g26550.v2.2, Sp4g17110.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB01g009450.2N, BniB03g034510.2N, BniB04g046190.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G0615 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0714 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno13g02950, gene.Cymno17g03920 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g00530 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-4855, nbisL1-mrna-652 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.1100 |
| Plantaginaceae | Plantago ovata | 2 | Pov_00012994, Pov_00038582 |
| Poaceae | Echinochloa crus-galli | 12 | AH01.2754, AH01.621, AH07.3106, AH09.2162, BH01.107 ... |
| Poaceae | Eleusine coracana subsp. coracana | 8 | gene-QOZ80_2AG0118570, gene-QOZ80_2AG0141970 ... |
| Poaceae | Hordeum vulgare | 4 | HORVU.MOREX.r3.1HG0053860.1, HORVU.MOREX.r3.2HG0194370.1 ... |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_012979, gene-QYE76_024588, gene-QYE76_046049 ... |
| Poaceae | Oryza coarctata | 7 | Oco03G018940, Oco04G019690, Oco05G029300, Oco06G030310 ... |
| Poaceae | Oryza sativa | 3 | LOC_Os02g47060.1, LOC_Os03g63810.1, LOC_Os04g50920.1 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_01G005400, gene-BS78_01G270900 ... |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0203844, Pt_Chr0203864, Pt_Chr0301478, Pt_Chr0301518 ... |
| Poaceae | Sporobolus alterniflorus | 13 | Chr04G032820, Chr06G004470, Chr06G021540, Chr07G032040 ... |
| Poaceae | Thinopyrum elongatum | 3 | Tel1E01G341400, Tel2E01G753100, Tel6E01G493100 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC1AG029960, gene_TRIDC1BG035450 ... |
| Poaceae | Triticum aestivum | 12 | TraesCS1A02G197400.1, TraesCS1B02G212000.1 ... |
| Poaceae | Zea mays | 6 | Zm00001eb025220_P001, Zm00001eb064880_P002 ... |
| Poaceae | Zoysia japonica | 7 | nbis-gene-16782, nbis-gene-22156, nbis-gene-22733 ... |
| Poaceae | Zoysia macrostachya | 7 | Zma_g13014, Zma_g14195, Zma_g15779, Zma_g16948, Zma_g20359 ... |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG06.852, evm.TU.LG11.7 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g06030 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_14_RagTag.1025 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-16867, nbisL1-mrna-25076 |
| Rhizophoraceae | Ceriops tagal | 3 | nbisL1-mrna-4798, nbisL1-mrna-5260, nbisL1-mrna-5889 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-17314, nbisL1-mrna-19262 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000022l.33, evm.TU.utg000025l.153 |
| Rhizophoraceae | Kandelia obovata | 2 | Maker00012238, Maker00016033 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-33, nbisL1-mrna-8605 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-10258, nbisL1-mrna-23019 |
| Salicaceae | Populus euphratica | 2 | populus_peu00118, populus_peu17182 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631659 |
| Solanaceae | Solanum chilense | 1 | SOLCI005063400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107010398 |
| Tamaricaceae | Reaumuria soongarica | 1 | MSTRG.14399_chr08_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC06G1190 |
| Zosteraceae | Zostera marina | 1 | Zosma03g24350.v3.1 |