HalophFGD

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Basic Information
Locus ID: nbisL1-mrna-4812
Species & Taxonomic ID: Carallia pectinifolia & 98586
Genome Assembly: GCA_037832335.1
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr02 20415678 20418099 + nbisL1-mrna-4812
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.97 40,028.14 Da 50.28 86.36 -0.30
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 30 70 1.2E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 30 126 1.7E-11 IPR036047
Gene3D G3DSA:1.20.1280.50 - 28 83 2.4E-7 -
SMART SM00256 fbox_2 34 74 7.5E-4 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_040369507.1 - 0
TrEMBL A0A5E4GEI9 - 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 1 gene_14496
Amaranthaceae Suaeda glauca 1 Sgl82814
Amaranthaceae Chenopodium album 1 gene:ENSEOMG00000044096
Anacardiaceae Pistacia vera 1 pistato.v30102390
Asparagaceae Asparagus officinalis 3 AsparagusV1_03.1.V1.1, AsparagusV1_03.2.V1.1 ...
AsparagusV1_07.1663.V1.1
Plantaginaceae Plantago ovata 2 Pov_00028667, Pov_00041475
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-4812
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.