Basic Information
Locus ID:
nbisL1-mrna-4780
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 63539022 | 63540968 | + | nbisL1-mrna-4780 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.19 | 51,126.81 Da | 49.64 | 81.20 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 181 | 416 | 4.69833E-104 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 180 | 416 | 1.9E-50 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 161 | 416 | 1.95E-67 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 161 | 244 | 4.4E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 245 | 442 | 1.3E-60 | - |
| SMART | SM00220 | serkin_6 | 174 | 424 | 5.9E-48 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 174 | 424 | 34.661526 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 284 | 296 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 324 | 334 | 6.1E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 278 | 296 | 6.1E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 240 | 253 | 6.1E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 387 | 409 | 6.1E-18 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 343 | 365 | 6.1E-18 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 108 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 140 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_040958671.1 | serine/threonine/tyrosine-protein kinase HT1-like [Gossypium hirsutum] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5D2IZ56 | Protein kinase domain-containing protein OS=Gossypium tomentosum OX=34277 GN=ES332_D10G030800v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology