Basic Information
Locus ID:
nbisL1-mrna-4753
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
CDPK-related kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 11119522 | 11124095 | + | nbisL1-mrna-4753 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 67,969.83 Da | 50.97 | 82.94 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 149 | 409 | 1.47752E-128 | - |
| Pfam | PF00069 | Protein kinase domain | 149 | 410 | 2.9E-71 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 438 | 592 | 9.91E-15 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 144 | 448 | 2.56E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 238 | 419 | 8.3E-64 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 430 | 589 | 1.7E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 150 | 237 | 1.9E-21 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 450 | 519 | 1.7E-14 | - |
| SMART | SM00220 | serkin_6 | 148 | 410 | 1.1E-100 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 148 | 410 | 50.915627 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 154 | 180 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 272 | 284 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 128 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G50530.1 | CDPK-related kinase. CDPK-related kinase | 0 |
| RefSeq | XP_043807182.1 | CDPK-related kinase 5-like isoform X1 [Manihot esculenta] | 0 |
| Q9SCS2 | CDPK-related kinase 5 OS=Arabidopsis thaliana OX=3702 GN=CRK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2C9UFN5 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_15G142700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology