Basic Information
Locus ID:
nbisL1-mrna-4749
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 11045462 | 11064421 | + | nbisL1-mrna-4749 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 366,771.31 Da | 49.27 | 91.01 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02774 | Semialdehyde dehydrogenase, dimerisation domain | 3053 | 3211 | 4.0E-18 | IPR012280 |
| Pfam | PF00225 | Kinesin motor domain | 234 | 565 | 3.9E-110 | IPR001752 |
| Pfam | PF01118 | Semialdehyde dehydrogenase, NAD binding domain | 2898 | 3034 | 9.2E-28 | IPR000534 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 2895 | 3069 | 4.93E-54 | IPR036291 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 228 | 599 | 1.27E-118 | IPR027417 |
| SUPERFAMILY | SSF55347 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain | 3044 | 3208 | 1.21E-52 | - |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 224 | 577 | 1.2E-136 | IPR036961 |
| Gene3D | G3DSA:3.40.50.720 | - | 2898 | 3226 | 8.0E-137 | - |
| Gene3D | G3DSA:3.30.360.10 | Dihydrodipicolinate Reductase; domain 2 | 3042 | 3208 | 8.0E-137 | - |
| SMART | SM00129 | kinesin_4 | 226 | 573 | 1.7E-164 | IPR001752 |
| SMART | SM00859 | Semialdhyde_dh_3 | 2898 | 3036 | 1.6E-46 | IPR000534 |
| TIGRFAM | TIGR01850 | argC: N-acetyl-gamma-glutamyl-phosphate reductase | 2898 | 3240 | 3.3E-130 | IPR000706 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 228 | 565 | 123.644142 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 461 | 472 | - | IPR019821 |
| ProSitePatterns | PS01224 | N-acetyl-gamma-glutamyl-phosphate reductase active site. | 3039 | 3055 | - | IPR023013 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 429 | 446 | 4.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 462 | 480 | 4.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 300 | 321 | 4.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 515 | 536 | 4.2E-40 | IPR001752 |
| Hamap | MF_00150 | N-acetyl-gamma-glutamyl-phosphate reductase [argC]. | 2897 | 3234 | 40.794651 | IPR000706 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 22 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 55 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 134 | 177 | - | - |
| Coils | Coil | Coil | 2475 | 2537 | - | - |
| Coils | Coil | Coil | 2545 | 2565 | - | - |
| Coils | Coil | Coil | 1640 | 1660 | - | - |
| Coils | Coil | Coil | 1028 | 1048 | - | - |
| Coils | Coil | Coil | 1226 | 1246 | - | - |
| Coils | Coil | Coil | 1937 | 1964 | - | - |
| Coils | Coil | Coil | 2045 | 2065 | - | - |
| Coils | Coil | Coil | 2584 | 2604 | - | - |
| Coils | Coil | Coil | 948 | 996 | - | - |
| Coils | Coil | Coil | 2083 | 2103 | - | - |
| Coils | Coil | Coil | 2740 | 2795 | - | - |
| Coils | Coil | Coil | 2412 | 2453 | - | - |
| Coils | Coil | Coil | 1324 | 1344 | - | - |
| Coils | Coil | Coil | 1095 | 1136 | - | - |
| Coils | Coil | Coil | 920 | 940 | - | - |
| Coils | Coil | Coil | 659 | 693 | - | - |
| Coils | Coil | Coil | 2651 | 2671 | - | - |
| Coils | Coil | Coil | 1187 | 1207 | - | - |
| Coils | Coil | Coil | 1478 | 1512 | - | - |
| Coils | Coil | Coil | 2132 | 2152 | - | - |
| Coils | Coil | Coil | 1605 | 1625 | - | - |
| Coils | Coil | Coil | 832 | 852 | - | - |
| Coils | Coil | Coil | 579 | 599 | - | - |
| Coils | Coil | Coil | 1352 | 1372 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
GO:0003777 (microtubule motor activity)
GO:0003942 (N-acetyl-gamma-glutamyl-phosphate reductase activity)
GO:0005524 (ATP binding)
GO:0008017 (microtubule binding)
GO:0016620 (oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor)
GO:0046983 (protein dimerization activity)
GO:0051287 (NAD binding)
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021639818.1 | kinesin-like protein KIN-12D [Hevea brasiliensis] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A835KFJ6 | Kinesin motor domain-containing protein OS=Salix dunnii OX=1413687 GN=SADUNF_Sadunf04G0100300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology