Basic Information
Locus ID:
nbisL1-mrna-4722
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 19688197 | 19689339 | + | nbisL1-mrna-4722 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 43,123.10 Da | 53.96 | 69.79 | -0.35 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_034914289.1 | uncharacterized protein LOC118048626 [Populus alba] | 0 |
| TrEMBL | A0A5N5LEH6 | - | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg26360 |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30102240, pistato.v30102250, pistato.v30290790 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120107635 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2955.V1.1, AsparagusV1_09.627.V1.1 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG03.1751, evm.TU.LG03.1752 |
| Plantaginaceae | Plantago ovata | 6 | Pov_00021091, Pov_00021093, Pov_00023786, Pov_00023787 ... |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.1067 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-21384, nbisL1-mrna-4722 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-19946, nbisL1-mrna-3557 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-16434 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000015l.274 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-20733 |
| Salicaceae | Populus euphratica | 1 | populus_peu36125 |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132598756, gene-LOC132644661 |
| Solanaceae | Solanum chilense | 4 | SOLCI001114600, SOLCI001114700, SOLCI001114800 ... |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107001447, gene-LOC107010251, gene-LOC107026041 ... |