Basic Information
Locus ID:
nbisL1-mrna-4691
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 19425667 | 19428529 | + | nbisL1-mrna-4691 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 58,100.76 Da | 58.02 | 62.75 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15489 | PHD_SF | 277 | 323 | 0.00420555 | - |
| CDD | cd06257 | DnaJ | 70 | 124 | 1.90276E-8 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 70 | 132 | 9.1E-12 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 64 | 135 | 7.33E-13 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 67 | 179 | 4.5E-12 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 69 | 127 | 1.1E-5 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 70 | 135 | 12.004765 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 171 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 155 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 410 | 427 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 203 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 380 | 453 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 452 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 176 | 193 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64360.2 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_037495967.1 | uncharacterized protein LOC105631631 [Jatropha curcas] | 0 |
| O13633 | Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pi041 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067L906 | J domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_24984 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology