Basic Information
Locus ID:
nbisL1-mrna-4689
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 62871990 | 62873074 | + | nbisL1-mrna-4689 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.85 | 22,057.70 Da | 26.12 | 109.90 | 0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 23 | 166 | 4.9E-27 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 23 | 166 | 8.73E-36 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 10 | 173 | 1.1E-36 | - |
| SMART | SM00220 | serkin_6 | 12 | 195 | 4.2E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 196 | 22.520422 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 108 | 120 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.4 | - | 0 |
| RefSeq | XP_016494831.1 | PREDICTED: serine/threonine-protein kinase STY17-like [Nicotiana tabacum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A392M3W8 | Octicosapeptide/phox/Bem1p domain kinase superfamily protein (Fragment) OS=Trifolium medium OX=97028 GN=A2U01_0002884 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology