Basic Information
Locus ID:
nbisL1-mrna-4671
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 19254872 | 19262434 | + | nbisL1-mrna-4671 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.80 | 107,206.29 Da | 38.56 | 94.02 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 628 | 894 | 3.36997E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 624 | 891 | 1.2E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 5.0E-9 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 46 | 385 | 2.21E-53 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 607 | 915 | 4.32E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 197 | 262 | 1.4E-13 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 593 | 697 | 4.4E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 698 | 903 | 1.0E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 263 | 402 | 1.2E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 192 | 1.0E-43 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 172 | 196 | 7.4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 268 | 292 | 350.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 314 | 338 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 220 | 245 | 75.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 622 | 898 | 1.7E-38 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 140.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 622 | 895 | 38.831059 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 628 | 650 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 742 | 754 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 960 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 959 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021684346.1 | - | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | B9T0N7 | ATP binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0126270 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology