Basic Information
Locus ID:
nbisL1-mrna-4670
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000139F_pilon | 3651448 | 3655767 | - | nbisL1-mrna-4670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 112,408.64 Da | 37.25 | 101.86 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 68 | 2.4E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 502 | 561 | 2.8E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 96 | 155 | 7.4E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 691 | 968 | 1.8E-46 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 285 | 9.35E-55 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 236 | 592 | 2.38E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 672 | 971 | 1.48E-70 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 285 | 4.4E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 673 | 767 | 4.7E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 381 | 493 | 9.6E-25 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 768 | 985 | 1.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 182 | 1.9E-42 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 494 | 614 | 3.4E-30 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 380 | 3.1E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 142 | 166 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 500 | 524 | 48.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 239 | 263 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 190 | 214 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 548 | 572 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 118 | 141 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 574 | 595 | 400.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 689 | 971 | 3.2E-26 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 310 | 334 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 370.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 689 | 978 | 37.643803 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 822 | 834 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 695 | 717 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_011008121.1 | PREDICTED: receptor-like protein kinase 5 [Populus euphratica] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KLD6 | Receptor-like protein kinase 5 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology