halophFGD

Basic Information

Locus ID: nbisL1-mrna-4590

Species & Taxonomic ID: Hibiscus hamabo Siebold & Zucc. & 1841

Genome Assembly:

Description: cysteine-rich repeat secretory protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr1	62077455	62077952	+	nbisL1-mrna-4590

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.57	18,714.30 Da	46.41	82.18	-0.03

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF01657	Salt stress response/antifungal	36	124	5.3E-16	IPR002902
Gene3D	G3DSA:3.30.430.20	-	25	127	7.8E-20	IPR038408
ProSiteProfiles	PS51473	Gnk2-homologous domain profile.	25	127	17.213018	IPR002902

Best hit

Source	Best Hit ID	Description
TAIR	AT1G63550.1	Receptor-like protein kinase-related family protein.
RefSeq	XP_039032395.1	cysteine-rich repeat secretory protein 38-like [Hibiscus syriacus]
Swiss-Prot	P0DO63	Antimicrobial ginkbilobin-2-like protein OS=Castanea crenata OX=103480 GN=GNK2L PE=2 SV=1
TrEMBL	A0A6A2XH38	Transcription factor ILR3-like OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00111678pilonHSYRG00130 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	13	jg16776, jg20381, jg20386, jg20387, jg20390, jg24166, jg424 ... jg24167, jg39818, jg6782, jg7517, jg7520, jg8083
Aizoaceae	Mesembryanthemum crystallinum	14	gene_151, gene_152, gene_153, gene_20971, gene_22090 ... gene_22091, gene_22102, gene_22103, gene_22104, gene_22105, gene_22106, gene_26008, gene_26010, gene_6518
Amaranthaceae	Atriplex hortensis	11	Ah017003, Ah017640, Ah017641, Ah017654, Ah017686, Ah017689 ... Ah017690, Ah017729, Ah028408, Ah028410, Ah030393
Amaranthaceae	Beta vulgaris	16	BVRB_5g118760, BVRB_6g150050, BVRB_7g161960, BVRB_8g186760 ... BVRB_8g186770, BVRB_8g186790, BVRB_8g186840, BVRB_8g186990, BVRB_8g187000, BVRB_8g187020, BVRB_8g187090, BVRB_8g187100, BVRB_8g187120, BVRB_8g187130, BVRB_8g187300, BVRB_9g212380
Amaranthaceae	Salicornia bigelovii	24	Sbi_jg26647, Sbi_jg27113, Sbi_jg33433, Sbi_jg33916 ... Sbi_jg358, Sbi_jg40880, Sbi_jg40899, Sbi_jg40912, Sbi_jg40933, Sbi_jg40950, Sbi_jg41071, Sbi_jg41074, Sbi_jg41076, Sbi_jg41085, Sbi_jg41086, Sbi_jg49782, Sbi_jg49783, Sbi_jg49837, Sbi_jg49862, Sbi_jg49879, Sbi_jg49902, Sbi_jg49912, Sbi_jg49915, Sbi_jg56073
Amaranthaceae	Salicornia europaea	12	Seu_jg1474, Seu_jg1475, Seu_jg1482, Seu_jg1483, Seu_jg1486 ... Seu_jg1489, Seu_jg1490, Seu_jg15163, Seu_jg1532, Seu_jg1533, Seu_jg1555, Seu_jg8113
Amaranthaceae	Suaeda aralocaspica	5	GOSA_00011833, GOSA_00017152, GOSA_00017153, GOSA_00017168 ... GOSA_00017177
Amaranthaceae	Suaeda glauca	37	Sgl25439, Sgl25450, Sgl35556, Sgl45516, Sgl46055, Sgl46056 ... Sgl46086, Sgl46087, Sgl46092, Sgl46093, Sgl46129, Sgl46130, Sgl46133, Sgl46144, Sgl46146, Sgl46155, Sgl46224, Sgl50321, Sgl50752, Sgl50753, Sgl50786, Sgl50788, Sgl50801, Sgl50802, Sgl50803, Sgl50828, Sgl50829, Sgl50832, Sgl50843, Sgl50845, Sgl50854, Sgl50879, Sgl50931, Sgl71229, Sgl73951, Sgl74799, Sgl77459
Amaranthaceae	Chenopodium album	22	gene:ENSEOMG00000006651, gene:ENSEOMG00000007032 ... gene:ENSEOMG00000007268, gene:ENSEOMG00000009424, gene:ENSEOMG00000009560, gene:ENSEOMG00000009864, gene:ENSEOMG00000010382, gene:ENSEOMG00000011423, gene:ENSEOMG00000011486, gene:ENSEOMG00000031141, gene:ENSEOMG00000033029, gene:ENSEOMG00000033904, gene:ENSEOMG00000034897, gene:ENSEOMG00000035492, gene:ENSEOMG00000036353, gene:ENSEOMG00000036873, gene:ENSEOMG00000036952, gene:ENSEOMG00000038782, gene:ENSEOMG00000039306, gene:ENSEOMG00000045598, gene:ENSEOMG00000046246, gene:ENSEOMG00000046497
Amaranthaceae	Chenopodium quinoa	15	CQ.Regalona.r1.7AG0009130, CQ.Regalona.r1.7AG0016700 ... CQ.Regalona.r1.7BG0017920, CQ.Regalona.r1.8AG0002450, CQ.Regalona.r1.8AG0002590, CQ.Regalona.r1.8AG0002680, CQ.Regalona.r1.8AG0002690, CQ.Regalona.r1.8AG0002860, CQ.Regalona.r1.8BG0002470, CQ.Regalona.r1.8BG0002520, CQ.Regalona.r1.8BG0002540, CQ.Regalona.r1.8BG0002770, CQ.Regalona.r1.8BG0002780, CQ.Regalona.r1.8BG0002890, CQ.Regalona.r1.9BG0009420
Anacardiaceae	Pistacia vera	20	pistato.v30018790, pistato.v30020690, pistato.v30030830 ... pistato.v30030840, pistato.v30032730, pistato.v30032950, pistato.v30032960, pistato.v30032970, pistato.v30095470, pistato.v30121040, pistato.v30166840, pistato.v30173480, pistato.v30173490, pistato.v30189620, pistato.v30189630, pistato.v30189640, pistato.v30198370, pistato.v30198650, pistato.v30198870, pistato.v30220590
Apiaceae	Apium graveolens	4	Ag7G00104, Ag7G01770, Ag8G01017, AgUnG01655
Arecaceae	Cocos nucifera	15	COCNU_02G014560, COCNU_02G014570, COCNU_04G015060 ... COCNU_04G015070, COCNU_06G011140, COCNU_14G007140, COCNU_14G007160, COCNU_14G007190, scaffold003969G000010, scaffold004783G000010, scaffold006238G000030, scaffold038489G000010, scaffold045056G000050, scaffold045056G000060, scaffold051046G000010
Arecaceae	Phoenix dactylifera	7	gene-LOC103699155, gene-LOC103703442, gene-LOC103703581 ... gene-LOC103706215, gene-LOC103714841, gene-LOC120109525, gene-LOC120110569
Asparagaceae	Asparagus officinalis	3	AsparagusV1_03.1411.V1.1, AsparagusV1_03.1412.V1.1 ... AsparagusV1_03.1414.V1.1
Asteraceae	Flaveria trinervia	6	Ftri10G21634, Ftri11G05502, Ftri11G18914, Ftri14G12303 ... Ftri14G27949, Ftri9G02616
Brassicaceae	Arabidopsis thaliana	26	AT1G61750.1, AT1G63550.1, AT1G63560.1, AT1G63570.1 ... AT1G63580.1, AT1G63590.1, AT1G63600.1, AT2G31620.1, AT3G21940.1, AT3G21945.1, AT3G21960.2, AT3G22000.1, AT3G22010.1, AT3G22020.1, AT3G22030.1, AT3G22040.1, AT3G22050.1, AT3G22053.1, AT3G22060.1, AT3G58310.1, AT4G20680.1, AT4G23170.1, AT5G41280.1, AT5G41290.1, AT5G41300.1, AT5G48540.1
Brassicaceae	Eutrema salsugineum	20	Thhalv10005717m.g.v1.0, Thhalv10021371m.g.v1.0 ... Thhalv10021912m.g.v1.0, Thhalv10021965m.g.v1.0, Thhalv10021973m.g.v1.0, Thhalv10021994m.g.v1.0, Thhalv10022109m.g.v1.0, Thhalv10022112m.g.v1.0, Thhalv10022150m.g.v1.0, Thhalv10022153m.g.v1.0, Thhalv10022184m.g.v1.0, Thhalv10022331m.g.v1.0, Thhalv10022388m.g.v1.0, Thhalv10023893m.g.v1.0, Thhalv10023905m.g.v1.0, Thhalv10027847m.g.v1.0, Thhalv10027911m.g.v1.0, Thhalv10028048m.g.v1.0, Thhalv10028207m.g.v1.0, Thhalv10028233m.g.v1.0
Brassicaceae	Schrenkiella parvula	13	Sp2g01040.v2.2, Sp2g01050.v2.2, Sp2g01060.v2.2 ... Sp2g01070.v2.2, Sp2g18900.v2.2, Sp3g19880.v2.2, Sp3g19890.v2.2, Sp3g27510.v2.2, Sp5g04470.v2.2, Sp5g14760.v2.2, Sp7g00650.v2.2, Sp7g19330.v2.2, SpUn0010_0130.v2.2
Brassicaceae	Brassica nigra	14	BniB01g025090.2N, BniB01g040870.2N, BniB02g013400.2N ... BniB02g013410.2N, BniB02g059240.2N, BniB02g069620.2N, BniB03g025010.2N, BniB03g025080.2N, BniB04g022180.2N, BniB04g024130.2N, BniB04g024140.2N, BniB07g047640.2N, BniB07g049550.2N, BniB07g049570.2N
Casuarinaceae	Casuarina equisetifolia	17	Ceq01G0219, Ceq01G0237, Ceq02G2465, Ceq03G0249, Ceq03G2699 ... Ceq04G0984, Ceq04G1373, Ceq04G1374, Ceq04G1375, Ceq04G1542, Ceq05G1894, Ceq05G1896, Ceq05G1897, Ceq05G1898, Ceq05G2213, Ceq05G2334, Ceq05G2335
Casuarinaceae	Casuarina glauca	29	Cgl02G2559, Cgl02G2851, Cgl03G0300, Cgl04G0056, Cgl04G0067 ... Cgl04G0551, Cgl04G1110, Cgl04G1113, Cgl04G1223, Cgl04G1534, Cgl04G1535, Cgl04G1537, Cgl04G1717, Cgl04G1730, Cgl05G1882, Cgl05G1883, Cgl05G1885, Cgl05G1886, Cgl05G1893, Cgl05G1894, Cgl05G1895, Cgl05G1896, Cgl05G1897, Cgl05G1898, Cgl05G2318, Cgl05G2326, Cgl08G1556, CglSG0052, CglSG0053
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno13g00550, gene.Cymno13g00610
Hydrocharitaceae	Thalassia testudinum	7	gene.Thate04g03970, gene.Thate04g03990, gene.Thate04g04010 ... gene.Thate04g04070, gene.Thate04g04080, gene.Thate05g23180, gene.Thate05g29400
Malvaceae	Hibiscus hamabo Siebold & Zucc.	6	nbisL1-mrna-3856, nbisL1-mrna-4590, nbisL1-mrna-4591 ... nbisL1-mrna-4826, nbisL1-mrna-7670, nbisL1-mrna-9779
Nitrariaceae	Nitraria sibirica	7	evm.TU.LG01.177, evm.TU.LG04.2023, evm.TU.LG04.2024 ... evm.TU.LG04.2025, evm.TU.LG04.2026, evm.TU.LG12.609, evm.TU.LG12.612
Plantaginaceae	Plantago ovata	9	Pov_00000800, Pov_00001068, Pov_00002986, Pov_00004998 ... Pov_00004999, Pov_00039000, Pov_00039004, Pov_00039006, Pov_00039007
Plumbaginaceae	Limonium bicolor	8	Lb1G05685, Lb1G05718, Lb2G14912, Lb4G22861, Lb4G23240 ... Lb4G23926, Lb5G26693, Lb6G30408
Poaceae	Echinochloa crus-galli	13	AH01.1522, AH01.4156, AH09.322, AH09.323, BH01.1724 ... BH01.4467, BH05.2069, BH05.802, BH05.804, BH09.409, CH01.4725, CH04.2119, CH05.928
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_3AG0228030, gene-QOZ80_3AG0243180 ... gene-QOZ80_3BG0273910, gene-QOZ80_3BG0285090, gene-QOZ80_5AG0407850, gene-QOZ80_5BG0456100
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.2HG0138980.1, HORVU.MOREX.r3.4HG0387540.1 ... HORVU.MOREX.r3.4HG0413720.1.CDS1, HORVU.MOREX.r3.5HG0516270.1.CDS1
Poaceae	Lolium multiflorum	7	gene-QYE76_008758, gene-QYE76_014550, gene-QYE76_014924 ... gene-QYE76_052053, gene-QYE76_058220, gene-QYE76_067218, gene-QYE76_068965
Poaceae	Oryza coarctata	9	Oco05G009710, Oco05G016970, Oco06G009990, Oco06G014620 ... Oco07G000090, Oco08G001420, Oco09G000650, Oco10G000720, Oco16G001680
Poaceae	Oryza sativa	10	LOC_Os03g16950.1, LOC_Os03g16960.1, LOC_Os03g19840.1 ... LOC_Os03g36650.1, LOC_Os04g09780.1, LOC_Os05g02200.1, LOC_Os08g04210.1, LOC_Os08g04230.1, LOC_Os08g04240.1, LOC_Os08g04250.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G170900, gene-BS78_01G399600 ... gene-BS78_09G013900
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0306401, Pt_Chr0500629
Poaceae	Sporobolus alterniflorus	6	Chr04G007870, Chr17G012120, Chr18G002680, Chr18G012780 ... Chr20G008300, Chr22G004960
Poaceae	Thinopyrum elongatum	7	Tel1E01G077200, Tel1E01G077400, Tel1E01G077500 ... Tel1E01G077600, Tel2E01G901000, Tel4E01G361700, Tel4E01G584100
Poaceae	Triticum dicoccoides	7	gene_TRIDC1AG004090, gene_TRIDC1BG005010 ... gene_TRIDC2BG080820, gene_TRIDC4AG013490, gene_TRIDC4BG036870, gene_TRIDC4BG059510, gene_TRIDC5AG074430
Poaceae	Triticum aestivum	12	TraesCS1A02G035600.1.cds1, TraesCS1B02G045300.1.cds1 ... TraesCS1D02G036900.1.cds1, TraesCS1D02G037000.1.cds1, TraesCS2B02G242400.1, TraesCS4A02G099000.1, TraesCS4B02G205300.1.cds1, TraesCS4B02G355900.1.cds1, TraesCS4D02G206200.1.cds1, TraesCS4D02G349300.1.cds1, TraesCS5A02G525100.1.cds1, TraesCS5B02G276900.1
Poaceae	Zea mays	3	Zm00001eb012570_P001, Zm00001eb043080_P001 ... Zm00001eb266690_P001
Poaceae	Zoysia japonica	9	nbis-gene-18362, nbis-gene-2068, nbis-gene-25312 ... nbis-gene-45092, nbis-gene-46641, nbis-gene-53346, nbis-gene-53356, nbis-gene-6351, nbis-gene-808
Poaceae	Zoysia macrostachya	3	Zma_g1516, Zma_g23926, Zma_g27573
Portulacaceae	Portulaca oleracea	12	evm.TU.LG01.1794, evm.TU.LG01.1809, evm.TU.LG01.1810 ... evm.TU.LG01.1811, evm.TU.LG04.1908, evm.TU.LG06.434, evm.TU.LG10.689, evm.TU.LG14.1012, evm.TU.LG14.1013, evm.TU.LG14.1014, evm.TU.LG14.1015, evm.TU.LG20.1081
Posidoniaceae	Posidonia oceanica	5	gene.Posoc10g01470, gene.Posoc10g02010, gene.Posoc10g02060 ... gene.Posoc10g02070, gene.Posoc10g07520
Rhizophoraceae	Bruguiera sexangula	11	evm.TU.31372.1, evm.TU.31519.1 ... evm.TU.Scaffold_12_RagTag.867, evm.TU.Scaffold_12_RagTag.869, evm.TU.Scaffold_14_RagTag.884, evm.TU.Scaffold_15_RagTag.303, evm.TU.Scaffold_16_RagTag.393, evm.TU.Scaffold_5_RagTag.1478, evm.TU.Scaffold_5_RagTag.1479, evm.TU.Scaffold_5_RagTag.1480, evm.TU.Scaffold_5_RagTag.1721
Rhizophoraceae	Carallia pectinifolia	31	nbisL1-mrna-11775, nbisL1-mrna-11969, nbisL1-mrna-11970 ... nbisL1-mrna-12214, nbisL1-mrna-16646, nbisL1-mrna-16647, nbisL1-mrna-16648, nbisL1-mrna-20825, nbisL1-mrna-22763, nbisL1-mrna-23357, nbisL1-mrna-23358, nbisL1-mrna-23811, nbisL1-mrna-23896, nbisL1-mrna-23920, nbisL1-mrna-26575, nbisL1-mrna-29650, nbisL1-mrna-29659, nbisL1-mrna-29660, nbisL1-mrna-29661, nbisL1-mrna-29670, nbisL1-mrna-29672, nbisL1-mrna-29701, nbisL1-mrna-29703, nbisL1-mrna-29705, nbisL1-mrna-29706, nbisL1-mrna-29707, nbisL1-mrna-29708, nbisL1-mrna-29709, nbisL1-mrna-29710, nbisL1-mrna-29711, nbisL1-mrna-29712
Rhizophoraceae	Ceriops tagal	12	nbisL1-mrna-1061, nbisL1-mrna-10712, nbisL1-mrna-10961 ... nbisL1-mrna-11222, nbisL1-mrna-12961, nbisL1-mrna-16175, nbisL1-mrna-16213, nbisL1-mrna-18872, nbisL1-mrna-19868, nbisL1-mrna-4753, nbisL1-mrna-5510, nbisL1-mrna-9989
Rhizophoraceae	Ceriops zippeliana	6	nbisL1-mrna-10807, nbisL1-mrna-11012, nbisL1-mrna-20815 ... nbisL1-mrna-20817, nbisL1-mrna-21672, nbisL1-mrna-7901
Rhizophoraceae	Kandelia candel	13	add.evm.TU.utg000006l.357, add.evm.TU.utg000006l.429 ... add.evm.TU.utg000013l.120, add.evm.TU.utg000015l.22, add.evm.TU.utg000023l.77, add.evm.TU.utg000025l.35, evm.TU.utg000001l.188, evm.TU.utg000015l.58, evm.TU.utg000015l.60, evm.TU.utg000015l.74, evm.TU.utg000015l.76, evm.TU.utg000015l.77, evm.TU.utg000027l.57
Rhizophoraceae	Kandelia obovata	2	Maker00014064, Maker00015459
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-10531, nbisL1-mrna-19154, nbisL1-mrna-20852 ... nbisL1-mrna-21007, nbisL1-mrna-22399
Rhizophoraceae	Rhizophora mangle	13	nbisL1-mrna-14371, nbisL1-mrna-14372, nbisL1-mrna-15435 ... nbisL1-mrna-15650, nbisL1-mrna-16977, nbisL1-mrna-23242, nbisL1-mrna-23464, nbisL1-mrna-24747, nbisL1-mrna-25016, nbisL1-mrna-2649, nbisL1-mrna-2650, nbisL1-mrna-2651, nbisL1-mrna-2655
Salicaceae	Populus euphratica	18	populus_peu10231, populus_peu10244, populus_peu18355 ... populus_peu18357, populus_peu18358, populus_peu18362, populus_peu18364, populus_peu18366, populus_peu21558, populus_peu22678, populus_peu22679, populus_peu24113, populus_peu24114, populus_peu24115, populus_peu24116, populus_peu24117, populus_peu30828, populus_peu30844
Solanaceae	Lycium barbarum	9	gene-LOC132603917, gene-LOC132609779, gene-LOC132623729 ... gene-LOC132638288, gene-LOC132638684, gene-LOC132638686, gene-LOC132638690, gene-LOC132638692, gene-LOC132639281
Solanaceae	Solanum chilense	5	SOLCI000153000, SOLCI000253000, SOLCI000833400 ... SOLCI003844300, SOLCI006422800
Solanaceae	Solanum pennellii	3	gene-LOC107006768, gene-LOC107010099, gene-LOC107029668
Tamaricaceae	Reaumuria soongarica	3	MSTRG.6624_chr04_+, gene_14674, gene_5383
Tamaricaceae	Tamarix chinensis	12	TC01G2267, TC07G1132, TC07G1137, TC07G1140, TC07G1142 ... TC08G0265, TC08G0268, TC08G0288, TC08G0320, TC08G0325, TC08G0328, TC08G0741
Zosteraceae	Zostera marina	6	Zosma01g27870.v3.1, Zosma02g13510.v3.1, Zosma05g04740.v3.1 ... Zosma05g05490.v3.1, Zosma207g00010.v3.1, Zosma382g00020.v3.1