Basic Information
Locus ID:
nbisL1-mrna-4564
Species & Taxonomic ID:
Carallia pectinifolia & 98586
Genome Assembly:
GCA_037832335.1
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr02 | 18539397 | 18552801 | - | nbisL1-mrna-4564 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 66,486.38 Da | 40.32 | 85.97 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 115 | 373 | 1.67222E-135 | - |
| Pfam | PF13499 | EF-hand domain pair | 420 | 480 | 7.8E-9 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 118 | 374 | 2.9E-73 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 492 | 555 | 4.1E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 403 | 581 | 1.99E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 105 | 399 | 2.29E-84 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 383 | 558 | 8.7E-53 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 117 | 201 | 6.3E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 202 | 382 | 1.5E-60 | - |
| SMART | SM00220 | serkin_6 | 116 | 374 | 1.0E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 457 | 485 | 9.5 | IPR002048 |
| SMART | SM00054 | efh_1 | 529 | 557 | 1.3E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 421 | 449 | 5.2E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 493 | 521 | 1.4E-5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 489 | 524 | 15.322372 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 525 | 560 | 14.234451 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 116 | 374 | 47.071178 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 417 | 452 | 16.075548 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 122 | 145 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 538 | 550 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 430 | 442 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 502 | 514 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 236 | 248 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_021620700.1 | calcium-dependent protein kinase 13 [Manihot esculenta] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2P2LMZ4 | Calcium-dependent protein kinase 13 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology