Basic Information
Locus ID:
nbisL1-mrna-4526
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr15 | 4794501 | 4798381 | + | nbisL1-mrna-4526 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 63,943.36 Da | 39.20 | 83.66 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 60 | 318 | 4.19571E-144 | - |
| CDD | cd00051 | EFh | 438 | 500 | 1.56228E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 367 | 425 | 8.3E-9 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 437 | 500 | 3.2E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 61 | 319 | 3.1E-77 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 60 | 329 | 8.5E-88 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 343 | 512 | 2.38E-42 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 328 | 503 | 7.8E-51 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 147 | 327 | 2.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 146 | 6.2E-29 | - |
| SMART | SM00220 | serkin_6 | 61 | 319 | 2.2E-103 | IPR000719 |
| SMART | SM00054 | efh_1 | 366 | 394 | 9.5E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 402 | 430 | 0.098 | IPR002048 |
| SMART | SM00054 | efh_1 | 474 | 502 | 4.7E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 438 | 466 | 0.0042 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 434 | 469 | 12.700205 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 398 | 433 | 9.018011 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 362 | 397 | 12.560727 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 61 | 319 | 49.869713 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 470 | 505 | 13.14653 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 447 | 459 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 411 | 423 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 181 | 193 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 483 | 495 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 67 | 90 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_034893626.1 | calcium-dependent protein kinase 7-like [Populus alba] | 0 |
| Q38873 | Calcium-dependent protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CPK7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067JE09 | Calcium-dependent protein kinase OS=Jatropha curcas OX=180498 GN=JCGZ_25932 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology