Basic Information
Locus ID:
nbisL1-mrna-4498
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Metal tolerance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000139F_pilon | 2512533 | 2516669 | - | nbisL1-mrna-4498 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 44,845.90 Da | 43.99 | 101.27 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01545 | Cation efflux family | 107 | 300 | 1.7E-30 | IPR002524 |
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 316 | 380 | 3.5E-12 | IPR027470 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 304 | 381 | 6.54E-16 | IPR036837 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 101 | 301 | 2.09E-41 | IPR027469 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 104 | 299 | 1.2E-41 | IPR027469 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 302 | 382 | 2.5E-17 | IPR036837 |
| TIGRFAM | TIGR01297 | CDF: cation diffusion facilitator family transporter | 105 | 381 | 7.0E-32 | IPR002524 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_021626184.1 | metal tolerance protein 11 isoform X1 [Manihot esculenta] | 0 |
| O80632 | Metal tolerance protein 11 OS=Arabidopsis thaliana OX=3702 GN=MTP11 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MI39 | Cation efflux protein/ zinc transporter OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology