Basic Information
Locus ID:
nbisL1-mrna-4438
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
cysteine-rich receptor-like protein kinase 43
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 60866811 | 60870220 | + | nbisL1-mrna-4438 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 80,935.33 Da | 49.70 | 83.28 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 325 | 647 | 4.0E-40 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 144 | 229 | 4.1E-11 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 37 | 123 | 6.6E-11 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 306 | 680 | 1.56E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 445 | 656 | 3.1E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 283 | 397 | 8.7E-29 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 24 | 125 | 2.9E-14 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 135 | 232 | 6.6E-14 | IPR038408 |
| SMART | SM00220 | serkin_6 | 322 | 653 | 1.1E-12 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 24 | 125 | 14.388763 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 130 | 232 | 14.959045 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 322 | 653 | 33.205727 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 491 | 503 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 328 | 350 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 686 | 711 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 697 | 711 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28670.1 | Protein kinase family protein with domain of unknown function (DUF26). | 0 |
| RefSeq | XP_017647634.1 | PREDICTED: putative cysteine-rich receptor-like protein kinase 43 [Gossypium arboreum] | 0 |
| Q9M0G5 | Cysteine-rich receptor-like protein kinase 46 OS=Arabidopsis thaliana OX=3702 GN=CRK46 PE=3 SV=1 | 0 | |
| TrEMBL | A0A8J5Y374 | Cysteine-rich receptor-like protein kinase 25 OS=Gossypium anomalum OX=47600 GN=CXB51_026569 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology