Basic Information
Locus ID:
nbisL1-mrna-435
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Type I inositol 1,4,5-trisphosphate 5-phosphatase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000003F_pilon | 2551925 | 2556344 | + | nbisL1-mrna-435 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.80 | 98,018.92 Da | 41.48 | 85.03 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03372 | Endonuclease/Exonuclease/phosphatase family | 582 | 830 | 1.6E-10 | IPR005135 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 207 | 563 | 8.55E-22 | IPR036322 |
| SUPERFAMILY | SSF56219 | DNase I-like | 555 | 833 | 2.02E-25 | IPR036691 |
| Gene3D | G3DSA:2.130.10.10 | - | 424 | 570 | 3.1E-10 | IPR015943 |
| Gene3D | G3DSA:2.130.10.10 | - | 141 | 388 | 3.4E-9 | IPR015943 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 571 | 881 | 2.4E-49 | IPR036691 |
| SMART | SM00320 | WD40_4 | 196 | 234 | 11.0 | IPR001680 |
| SMART | SM00128 | i5p_5 | 575 | 885 | 3.7E-7 | IPR000300 |
| SMART | SM00320 | WD40_4 | 473 | 510 | 31.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 254 | 292 | 6.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 512 | 549 | 64.0 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 56 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G05630.1 | Endonuclease/exonuclease/phosphatase family protein. Encodes an inositol polyphosphate 5-phosphatase with phosphatase activity toward only Ins(1,4,5)P3. Induced in response to ABA and wounding treatments. Expressed in young seedlings and flowers, while no transcripts were detectable in maturated roots, stems, and rosette leaves Modulates the development of cotyledon veins through its regulation of auxin homeostasis. Involved in blue light lightstimulated increase in cytosolic calcium ion. | 0 |
| RefSeq | XP_021654895.1 | type I inositol polyphosphate 5-phosphatase 13-like isoform X1 [Hevea brasiliensis] | 0 |
| O80560 | Type I inositol polyphosphate 5-phosphatase 12 OS=Arabidopsis thaliana OX=3702 GN=IP5P12 PE=1 SV=2 | 0 | |
| TrEMBL | A0A061EQP2 | Endonuclease/exonuclease/phosphatase family protein isoform 3 OS=Theobroma cacao OX=3641 GN=TCM_021544 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology