Basic Information
Locus ID:
nbisL1-mrna-4274
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000014F_pilon | 6870873 | 6878923 | + | nbisL1-mrna-4274 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.20 | 104,140.40 Da | 49.58 | 81.19 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16796 | Microtubule binding | 338 | 475 | 2.0E-36 | IPR031852 |
| Pfam | PF00307 | Calponin homology (CH) domain | 24 | 146 | 1.3E-13 | IPR001715 |
| Pfam | PF00225 | Kinesin motor domain | 479 | 595 | 1.4E-42 | IPR001752 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 23 | 153 | 9.56E-20 | IPR036872 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 353 | 631 | 1.81E-86 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 296 | 477 | 1.2E-41 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 9 | 167 | 3.2E-25 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 478 | 638 | 2.0E-56 | IPR036961 |
| SMART | SM00033 | ch_5 | 24 | 137 | 0.0048 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 351 | 604 | 1.3E-97 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 479 | 596 | 49.380432 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 353 | 475 | 35.084351 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 22 | 146 | 14.757198 | IPR001715 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 426 | 447 | 7.0E-24 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 546 | 567 | 7.0E-24 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 865 | 886 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 865 | 897 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 650 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 650 | 693 | - | - |
| Coils | Coil | Coil | 600 | 630 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10310.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_048225833.1 | kinesin-like protein KIN-14L isoform X1 [Ricinus communis] | 0 |
| F4J2M6 | Kinesin-like protein KIN-14L OS=Arabidopsis thaliana OX=3702 GN=KIN14L PE=3 SV=2 | 0 | |
| TrEMBL | A0A8X8CWT9 | Uncharacterized protein OS=Populus tomentosa OX=118781 GN=POTOM_024793 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology