Basic Information
Locus ID:
nbisL1-mrna-4237
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001562F_pilon | 3912892 | 3914475 | + | nbisL1-mrna-4237 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 58,242.71 Da | 42.69 | 88.41 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 21 | 298 | 5.4E-62 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 312 | 4.05E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 9 | 99 | 2.5E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 103 | 341 | 1.2E-56 | - |
| SMART | SM00220 | serkin_6 | 21 | 298 | 5.7E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 21 | 298 | 48.371506 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 27 | 51 | - | IPR017441 |
| Coils | Coil | Coil | 487 | 514 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14480.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021649749.1 | serine/threonine-protein kinase BLUS1-like [Hevea brasiliensis] | 0 |
| O23304 | Serine/threonine-protein kinase BLUS1 OS=Arabidopsis thaliana OX=3702 GN=BLUS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067L721 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_02288 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg27809 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_15987 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah018163 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_3g056750 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg38594, Sbi_jg38844 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg10681 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00020191 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl02236, Sgl07389 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010668, gene:ENSEOMG00000030114 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.3AG0009320, CQ.Regalona.r1.3BG0009190 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30235310 |
| Arecaceae | Cocos nucifera | 1 | scaffold000285G000040 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103698533 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.2253.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri4G19466 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G14480.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10027433m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g12560.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g020060.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq07G1148 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl07G1206 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG11.855 |
| Poaceae | Echinochloa crus-galli | 1 | AH05.3286 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_5AG0375070 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0477430.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_004849 |
| Poaceae | Oryza coarctata | 2 | Oco05G020130, Oco06G020900 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g47470.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G172200 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0702436 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G331600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG032000, gene_TRIDC5BG033660 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G187400.1.cds1, TraesCS5B02G196400.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb405010_P001 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG11.1468 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_6_RagTag.835 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-15847 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-17350 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-711, nbisL1-mrna-712 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000011l.203 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-22909 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-4237 |
| Salicaceae | Populus euphratica | 6 | populus_peu07491, populus_peu08506, populus_peu08512 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132642874 |
| Solanaceae | Solanum chilense | 1 | SOLCI003624400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107021426 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_4205 |
| Tamaricaceae | Tamarix chinensis | 1 | TC07G1235 |