Basic Information
Locus ID:
nbisL1-mrna-4237
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Short Name:
CPK24
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 59118818 | 59121778 | - | nbisL1-mrna-4237 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 61,754.46 Da | 37.67 | 81.24 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 445 | 507 | 2.01727E-13 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 64 | 326 | 7.75078E-131 | - |
| Pfam | PF00069 | Protein kinase domain | 65 | 327 | 1.6E-74 | IPR000719 |
| Pfam | PF13202 | EF hand | 375 | 396 | 4.7E-5 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 444 | 507 | 2.3E-10 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 47 | 355 | 9.17E-87 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 356 | 514 | 3.52E-36 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 348 | 507 | 4.1E-43 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 368 | 436 | 4.1E-43 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 151 | 1.8E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 152 | 347 | 1.5E-57 | - |
| SMART | SM00220 | serkin_6 | 65 | 327 | 9.2E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 482 | 510 | 0.0024 | IPR002048 |
| SMART | SM00054 | efh_1 | 410 | 438 | 0.88 | IPR002048 |
| SMART | SM00054 | efh_1 | 445 | 473 | 0.018 | IPR002048 |
| SMART | SM00054 | efh_1 | 374 | 402 | 8.7E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 370 | 405 | 14.5413 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 441 | 476 | 12.449146 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 65 | 327 | 49.035805 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 478 | 513 | 11.974924 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 71 | 94 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 454 | 466 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 491 | 503 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 383 | 395 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 189 | 201 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G31500.1 | calcium-dependent protein kinase 24. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_039066863.1 | calcium-dependent protein kinase 24-like [Hibiscus syriacus] | 0 |
| Q9SIQ7 | Calcium-dependent protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=CPK24 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6A3BR36 | Calcium-dependent protein kinase 24 OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110015pilonHSYRG00219 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology