Basic Information
Locus ID:
nbisL1-mrna-4117
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 5033503 | 5040428 | - | nbisL1-mrna-4117 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.14 | 77,887.29 Da | 43.26 | 87.99 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 418 | 687 | 1.46633E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 119 | 179 | 1.3E-10 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 684 | 1.0E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 71 | 2.1E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 235 | 8.5E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 394 | 684 | 4.37E-71 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 251 | 4.3E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 491 | 708 | 9.4E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 489 | 1.3E-25 | - |
| SMART | SM00369 | LRR_typ_2 | 96 | 124 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 142 | 165 | 8.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 166 | 189 | 22.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 412 | 687 | 36.301071 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 418 | 441 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 695 | 718 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 249 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 280 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_043811953.1 | protein STRUBBELIG-RECEPTOR FAMILY 6 [Manihot esculenta] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LNH5 | Leucine-rich repeat receptor-like protein kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology