Basic Information
Locus ID:
nbisL1-mrna-4110
Species & Taxonomic ID:
Rhizophora apiculata & 106626
Genome Assembly:
GCA_037832385.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 4981021 | 4990272 | + | nbisL1-mrna-4110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 202,906.13 Da | 49.10 | 78.53 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 390 | 662 | 1.86714E-118 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1527 | 1790 | 5.41671E-151 | IPR044769 |
| CDD | cd15725 | FYVE_PIKfyve_Fab1 | 32 | 99 | 2.27457E-30 | - |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1735 | 1788 | 5.3E-7 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 102 | 6.7E-17 | IPR000306 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 410 | 658 | 1.6E-31 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1566 | 1732 | 3.5E-33 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1525 | 1790 | 1.24E-80 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 456 | 628 | 8.11E-42 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 32 | 107 | 7.2E-19 | IPR011011 |
| Gene3D | G3DSA:3.30.810.10 | - | 1650 | 1791 | 1.7E-42 | - |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 455 | 628 | 5.2E-53 | IPR027409 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 25 | 111 | 3.8E-20 | IPR013083 |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1507 | 1647 | 1.2E-35 | IPR027484 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 9.5E-20 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1500 | 1791 | 9.2E-127 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 13.150046 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1466 | 1790 | 57.252377 | IPR002498 |
| Coils | Coil | Coil | 1098 | 1125 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_021639412.1 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like isoform X1 [Hevea brasiliensis] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9W445 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Manihot esculenta OX=3983 GN=MANES_04G150500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology