Basic Information
Locus ID:
nbisL1-mrna-4054
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001562F_pilon | 2724636 | 2730740 | - | nbisL1-mrna-4054 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.52 | 85,931.75 Da | 52.42 | 69.00 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00130 | PAS | 132 | 233 | 5.59917E-14 | IPR000014 |
| CDD | cd13999 | STKc_MAP3K-like | 502 | 748 | 7.50913E-130 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 496 | 748 | 3.8E-69 | IPR001245 |
| Pfam | PF00989 | PAS fold | 124 | 233 | 1.0E-11 | IPR013767 |
| SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | 122 | 230 | 3.84E-19 | IPR035965 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 476 | 747 | 2.29E-85 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 489 | 573 | 4.7E-31 | - |
| Gene3D | G3DSA:3.30.450.20 | PAS domain | 133 | 237 | 8.9E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 574 | 772 | 2.2E-65 | - |
| SMART | SM00091 | pas_2 | 123 | 189 | 5.9E-8 | IPR000014 |
| SMART | SM00220 | serkin_6 | 496 | 755 | 2.8E-60 | IPR000719 |
| TIGRFAM | TIGR00229 | sensory_box: PAS domain S-box protein | 123 | 233 | 1.1E-14 | IPR000014 |
| ProSiteProfiles | PS50112 | PAS repeat profile. | 121 | 192 | 16.83127 | IPR000014 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 496 | 756 | 44.018234 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 615 | 627 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 719 | 741 | 3.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 656 | 666 | 3.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 570 | 583 | 3.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 675 | 697 | 3.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 609 | 627 | 3.4E-12 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 457 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 91 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 43 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 42 | - | - |
| Coils | Coil | Coil | 6 | 33 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49470.3 | PAS domain-containing protein tyrosine kinase family protein. | 0 |
| RefSeq | XP_012084067.1 | interferon-induced, double-stranded RNA-activated protein kinase isoform X2 [Jatropha curcas] | 0 |
| Q9C9U5 | Probable serine/threonine-protein kinase SIS8 OS=Arabidopsis thaliana OX=3702 GN=SIS8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L7M7 | Serine/threonine-protein kinase CTR1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology