Basic Information
Locus ID:
nbisL1-mrna-4006
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001562F_pilon | 2448713 | 2452591 | + | nbisL1-mrna-4006 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 55,519.39 Da | 38.14 | 85.44 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 181 | 447 | 1.44869E-105 | - |
| Pfam | PF00069 | Protein kinase domain | 176 | 443 | 2.4E-46 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 151 | 449 | 4.86E-82 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 251 | 462 | 7.6E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 156 | 250 | 1.8E-33 | - |
| SMART | SM00220 | serkin_6 | 175 | 446 | 1.1E-35 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 25 | 5.0 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 175 | 433 | 37.95475 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 181 | 204 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 297 | 309 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 469 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 496 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18500.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_021640244.1 | probable receptor-like protein kinase At5g18500 [Hevea brasiliensis] | 0 |
| Q8LEB6 | Probable receptor-like protein kinase At5g18500 OS=Arabidopsis thaliana OX=3702 GN=At5g18500 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2JD26 | Putative receptor-like protein kinase At5g18500 isoform X1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology