Basic Information
Locus ID:
nbisL1-mrna-3998
Species & Taxonomic ID:
Ceriops zippeliana & 413951
Genome Assembly:
GCA_037897445.1
Short Name:
CTR1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 000014F_pilon | 4953682 | 4963311 | + | nbisL1-mrna-3998 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 94,303.78 Da | 43.85 | 81.79 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 576 | 824 | 2.60146E-133 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 571 | 824 | 1.5E-70 | IPR001245 |
| Pfam | PF14381 | Ethylene-responsive protein kinase Le-CTR1 | 187 | 390 | 1.0E-72 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 557 | 823 | 5.13E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 563 | 648 | 4.3E-37 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 649 | 836 | 5.2E-64 | - |
| SMART | SM00220 | serkin_6 | 570 | 828 | 6.8E-66 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 570 | 828 | 45.686047 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 576 | 597 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 691 | 703 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 685 | 703 | 7.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 751 | 773 | 7.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 644 | 657 | 7.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 732 | 742 | 7.2E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 795 | 817 | 7.2E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03730.1 | Protein kinase superfamily protein. Homologous to the RAF family of serine/threonine protein kinases. Negative regulator in the ethylene signal transduction pathway. Interacts with the putative ethylene receptors ETR1 and ERS. Constitutively expressed. | 0 |
| RefSeq | XP_012072957.1 | serine/threonine-protein kinase CTR1 [Jatropha curcas] | 0 |
| Q05609 | Serine/threonine-protein kinase CTR1 OS=Arabidopsis thaliana OX=3702 GN=CTR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2KJN4 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology