Basic Information
Locus ID:
nbisL1-mrna-3928
Species & Taxonomic ID:
Hibiscus hamabo Siebold & Zucc. & 1841
Description:
receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 55818751 | 55821095 | + | nbisL1-mrna-3928 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.97 | 18,092.47 Da | 31.31 | 87.76 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 5 | 73 | 7.14E-11 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1 | 102 | 1.6E-14 | IPR032675 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18640.1 | Leucine-rich repeat protein kinase family protein. Required for root hair elongation during tip growth. | 0 |
| RefSeq | XP_039057340.1 | inactive receptor-like serine/threonine-protein kinase At2g40270 isoform X2 [Hibiscus syriacus] | 0 |
| C0LGQ4 | Protein MALE DISCOVERER 2 OS=Arabidopsis thaliana OX=3702 GN=MDIS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A3CI12 | Inactive receptor-like serine/threonine-protein kinase OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00006230pilonHSYRG00015 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-3928 |
| Poaceae | Thinopyrum elongatum | 3 | Tel2E01G616500, Tel2E01G629500, Tel7E01G680900 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC1AG049420 |
| Poaceae | Triticum aestivum | 6 | TraesCS2A02G258500.1, TraesCS2B02G607000.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb132630_P001 |