Basic Information
Locus ID:
nbisL1-mrna-3927
Species & Taxonomic ID:
Rhizophora mangle & 40031
Genome Assembly:
GCA_037832345.1
Description:
inactive receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| 001562F_pilon | 1801880 | 1805160 | + | nbisL1-mrna-3927 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.23 | 71,687.61 Da | 42.17 | 95.78 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 128 | 188 | 2.2E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 358 | 617 | 2.1E-36 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 42 | 77 | 3.5E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 359 | 618 | 1.28E-59 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 52 | 220 | 6.43E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 430 | 644 | 3.5E-48 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 323 | 429 | 2.2E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 243 | 6.8E-6 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 41 | 194 | 7.6E-43 | IPR032675 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 177 | 199 | 7.126702 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 639 | 32.711037 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 361 | 383 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 661 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_002305880.1 | probable inactive receptor kinase At1g48480 [Populus trichocarpa] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | B9H3B3 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G086100 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology